2024-11-22 11:06:31 INFO: 2592 exons in total
2024-11-22 11:06:31 WARNING: 8 of 161 Complete matches (5.0%) contain internal stop codons in Miniprot gene predictions
2024-11-22 11:06:32 INFO:
-------------------------------------------------------------------------------------------
|Results from dataset viridiplantae_odb10 |
-------------------------------------------------------------------------------------------
|C:37.9%[S:35.5%,D:2.4%],F:51.1%,M:11.1%,n:425,E:5.0% |
|161 Complete BUSCOs (C) (of which 8 contain internal stop codons) |
|151 Complete and single-copy BUSCOs (S) |
|10 Complete and duplicated BUSCOs (D) |
|217 Fragmented BUSCOs (F) |
|47 Missing BUSCOs (M) |
|425 Total BUSCO groups searched |
-------------------------------------------------------------------------------------------
2024-11-22 11:06:32 INFO: BUSCO analysis done with WARNING(s). Total running time: 2300 seconds
***** Summary of warnings: *****
2024-11-22 11:06:31 WARNING:busco.busco_tools.hmmer 8 of 161 Complete matches (5.0%) contain internal stop codons in Miniprot gene predictions
BUSCO: contigs >50kb
2024-11-25 06:00:44 WARNING: BUSCO did not find any match. Make sure to check the log files if this is unexpected.
2024-11-25 06:00:44 INFO:
---------------------------------------------------
|Results from dataset viridiplantae_odb10 |
---------------------------------------------------
|C:0.0%[S:0.0%,D:0.0%],F:0.0%,M:100.0%,n:425 |
|0 Complete BUSCOs (C) |
|0 Complete and single-copy BUSCOs (S) |
|0 Complete and duplicated BUSCOs (D) |
|0 Fragmented BUSCOs (F) |
|425 Missing BUSCOs (M) |
|425 Total BUSCO groups searched |
---------------------------------------------------
2024-11-25 06:00:44 INFO: BUSCO analysis done with WARNING(s). Total running time: 39 seconds
***** Summary of warnings: *****
2024-11-25 06:00:44 WARNING:busco.busco_tools.hmmer BUSCO did not find any match. Make sure to check the log files if this is unexpected.
BUSCO: Contigs >10kb
2024-11-25 06:22:43 INFO: 847 exons in total
2024-11-25 06:22:43 WARNING: 3 of 56 Complete matches (5.4%) contain internal stop codons in Miniprot gene predictions
2024-11-25 06:22:43 INFO:
-------------------------------------------------------------------------------------------
|Results from dataset viridiplantae_odb10 |
-------------------------------------------------------------------------------------------
|C:13.2%[S:12.9%,D:0.2%],F:16.2%,M:70.6%,n:425,E:5.4% |
|56 Complete BUSCOs (C) (of which 3 contain internal stop codons) |
|55 Complete and single-copy BUSCOs (S) |
|1 Complete and duplicated BUSCOs (D) |
|69 Fragmented BUSCOs (F) |
|300 Missing BUSCOs (M) |
|425 Total BUSCO groups searched |
-------------------------------------------------------------------------------------------
2024-11-25 06:22:43 INFO: BUSCO analysis done with WARNING(s). Total running time: 861 seconds
***** Summary of warnings: *****
2024-11-25 06:22:43 WARNING:busco.busco_tools.hmmer 3 of 56 Complete matches (5.4%) contain internal stop codons in Miniprot gene predictions
BUSCO: Contigs > 5kb
2024-11-25 07:06:34 INFO: 1873 exons in total
2024-11-25 07:06:34 WARNING: 6 of 123 Complete matches (4.9%) contain internal stop codons in Miniprot gene predictions
2024-11-25 07:06:34 INFO:
-------------------------------------------------------------------------------------------
|Results from dataset viridiplantae_odb10 |
-------------------------------------------------------------------------------------------
|C:28.9%[S:27.3%,D:1.6%],F:35.8%,M:35.3%,n:425,E:4.9% |
|123 Complete BUSCOs (C) (of which 6 contain internal stop codons) |
|116 Complete and single-copy BUSCOs (S) |
|7 Complete and duplicated BUSCOs (D) |
|152 Fragmented BUSCOs (F) |
|150 Missing BUSCOs (M) |
|425 Total BUSCO groups searched |
-------------------------------------------------------------------------------------------
2024-11-25 07:06:34 INFO: BUSCO analysis done with WARNING(s). Total running time: 1348 seconds
***** Summary of warnings: *****
2024-11-25 07:06:34 WARNING:busco.busco_tools.hmmer 6 of 123 Complete matches (4.9%) contain internal stop codons in Miniprot gene predictions
BUSCO: Contigs > 1kb
2024-11-25 08:25:41 INFO: 2574 exons in total
2024-11-25 08:25:41 WARNING: 8 of 161 Complete matches (5.0%) contain internal stop codons in Miniprot gene predictions
2024-11-25 08:25:41 INFO:
-------------------------------------------------------------------------------------------
|Results from dataset viridiplantae_odb10 |
-------------------------------------------------------------------------------------------
|C:37.9%[S:35.5%,D:2.4%],F:50.6%,M:11.5%,n:425,E:5.0% |
|161 Complete BUSCOs (C) (of which 8 contain internal stop codons) |
|151 Complete and single-copy BUSCOs (S) |
|10 Complete and duplicated BUSCOs (D) |
|215 Fragmented BUSCOs (F) |
|49 Missing BUSCOs (M) |
|425 Total BUSCO groups searched |
-------------------------------------------------------------------------------------------
2024-11-25 08:25:41 INFO: BUSCO analysis done with WARNING(s). Total running time: 1914 seconds
***** Summary of warnings: *****
2024-11-25 08:25:41 WARNING:busco.busco_tools.hmmer 8 of 161 Complete matches (5.0%) contain internal stop codons in Miniprot gene predictions